Buy Flagship Cruises & Events discount tickets today and save up to 51% on each ticket! Lowest prices guaranteed on FunEx!

No additional reservations required. Your dated discount tickets serve as your reservation. Please call Flagship Cruises & Events with your Entree choices for your Dining Cruise: (800) 442-7847.

**Flagship Cruises & Events has limited purchases per transaction. If you would like to purchase more, please create a separate transaction for the excess. Please see below.

  • North Harbor Tour (1 Hour) - 19 tickets
  • South Harbor Tour (1 Hour) - 19 tickets
  • Full Bay Tour 2 Hours - 19 tickets
  • Patriot Jet Boat - 19 tickets
  • Harbor Dinner Cruise (Thursday Friday) - 10 tickets
  • Sunday Dinner on the Bay - 10 tickets
  • Saturday Harbor Dinner Cruise - 10 tickets
  • Champagne Indoor Brunch Cruise - 10 tickets
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All Aboard!

Travel in style and comfort while exploring San Diego's beautiful sights on a vessel from the city's most experienced and knowledgeable family-owned fleet! Join us for a Flagship harbor cruise as we take in the sights, sounds, and stories of San Diego. Sail beneath the Coronado Bridge and past famous monuments while watching lively sea lions, Navy ships, and beautiful skyline architecture. Your tour guide will tell you stories about the city's history and present-day perspectives. For both newcomers and longtime residents, this voyage is a must. You can go around the Bay while having fun.

San Diego's oldest harbor cruise company offers the best bayside sightseeing. Select a 1-hour or 2-hour guided tour of San Diego Bay, conducted by experts in the field. The tours operate every day of the year. You can choose to relax inside or on the deck; you can buy beverages, snacks, and alcoholic beverages as well. Booking in advance is recommended. Come enjoy FunEx Flagship Cruises & Events tickets today!

The following highlights are included in your tour:

  • Indoor and outdoor seating are available across the ship for a complete 360-degree view.
  • 55+ Attractions Tour with Narration; and
  • You may buy drinks and snacks there.

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Another benefit of purchasing from FunEx is that you do not need to print your Flagship Cruises & Events discount tickets. Consider your phone your new best friend because all you need to do is present your e-tickets at the gates, and in you go!

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North Bay Tour

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Discover the incredible sights of North Bay on a guided tour, including the Cabrillo National Monument, the North Island Naval Air Station, Harbor Island, Shelter Island, and the Naval Sub Base. The duration of this guided journey is approximately 1 hour, and its length is approximately 12 miles.

This experience is included in your Flagship Cruises & Events tickets from FunEx!

South Bay Tour

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Admire the US Navy's surface fleet, the Coronado Bay Bridge, and the bustling shipyards while you're here. About 12 miles and an hour are covered in this guided excursion.

Full Bay Tour

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Our deluxe trip includes the Harbor and Shelter Islands, Point Loma, Cabrillo National Monument, North Island Naval Air Station, Submarine Base, Coronado Bridge, and more. This guided journey covers over 25 miles and takes about 2 hours.

Brand New: Friday Night Hops on the Harbor Craft Beer Dinner Cruise

Each month, a different San Diego brewery is featured in this Friday night dinner cruise. Guests enjoy two and a half hours of fine food, musical entertainment, and breathtaking city views as night falls. You will be on the water between the hours 6:30 and 9:00. Please call (800) 44-CRUISE (27847) to make a reservation.

Champagne Brunch

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The San Diego and Coronado waterfronts provide a picturesque backdrop for this two-hour brunch cruise. Enjoy a tasty meal and some live music in a fun and gorgeous setting away from the daily grind. It's perfect for birthdays, anniversaries, and other joyous occasions!

Hop on this fun cruise experience with your FunEx Flagship Cruises & Events tickets! Boarding time 30 minutes prior.

Whale Watching Tours

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Approximately 20,000 gray whales pass through the coast of San Diego between December and April. Join a guided whale-watching tour to learn more about these remarkable creatures and their extraordinary migration. A deeper understanding of the ocean ecology and real-time commentary will be provided by knowledgeable marine experts from the Birch Aquarium at Scripps.

This experience is included in your Flagship Cruises & Events discount ticket from FunEx.

Sunday Night Prime Rib Dinner Cruise!

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Enjoy two and a half hours of delicious food, live music, and breathtaking views of the San Diego skyline on this Sunday evening dinner cruise. The cruises are usually between the hours of 6:30 and 9:00. Our discount tickets include all fees and tips. Please call (800) 44-CRUISE (27847) to make a reservation.

Arrival

Typically, boarding begins 15-30 minutes before departure on most cruises. You'll need extra time to check in at the ticket booth. Bring your electronic Flagship Cruises & Events tickets with you and start having a good time.

Please note as well for the parking and directions below:

  • Ticket Booth & Broadway Pier Departures: 990 North Harbor Drive, San Diego, CA 92101, (619) 234-4111.
  • For parking locations and parking fee prices: you may click here to check the parking fees and locations available.

Onboarding

Keep in mind all the policies and guidelines. Should you have questions regarding this section, contact Flagship before your scheduled tour for Flagship Cruises & Events or call (619) 234-4111.

  • Safety

    We follow all the TSA's safety regulations. All our cruises are currently mask optional.

  • Seating

    Tours and excursions operate on a first-come, first-served basis for seats. When you book a dining cruise, the hostess will greet you at the door and seat your party at a separate table.

  • Children

    When accompanied by an adult, children ages 4-12 are welcome. Except for the Patriot Jet Boat, all trips include free admission for children under the age of 4. Children under the age of four are not permitted on deck for safety reasons for Patriot Jet Boat.

  • What to Wear

    As far as we know, there is no required attire. Guests on dinner cruises typically dress formally. For other types of cruises, a relaxed and comfy attire is recommended. Layering up is a good idea, so please do so. Sunscreen and a hat are must-haves on daytime cruises.

  • Food & Drinks

    There is a full bar and seasonal meals available on dining cruises. On the harbor tours and trips, they offer a snack bar stocked with hot dogs, sandwiches, snacks, and beverages. To see the complete menu online, CLICK HERE.

    • Prohibited Items
    • Coolers and glass bottles are not permitted.
    • You must use headphones if using a sound device.
    • There is a zero-tolerance policy regarding tobacco use on the boats.

Accessibility

Flagship Cruises & Events maintains an open-door policy for passengers of any background, including those with disabilities. Choose FunEx for Flagship Cruises & Events ticket and you’re good to go!

Things You Need to Know!

  • Arrive early.

    Please note that boarding times are scheduled 15-30 minutes before departure. So, we highly recommend you arrive earlier at the venue.

  • Wheelchair Accessibility.

    Flagship Cruises & Events offers a friendly wheelchair-accessible cruise on most tours in San Diego Harbor, including the famous San Diego Harbor Tours. Wheelchair access is limited to the vessel's internal main deck and galley; the upper deck and bathrooms are not accessible.

  • Protect yourself against the sun.

    Your excursion will take you to the open sea for a few hours, and prolonged exposure to sunlight could result in sunburn. Wear protective clothing and accessories, such as hats and sunscreen, when going outside.

  • Things to Bring.

    Keep in mind that as you make your way around San Diego through the cruise, you'll pass by some of the city's most famous monuments and glide past some fun marine creatures and stunning modern architecture. We recommend that guests bring a camera and binoculars so they can capture some of the beautiful scenery to take home and cherish fondly.

Frequently Asked Questions for Flagship Cruises & Events, CA

  1. Are reservations required for Flagship Cruises & Events?

    No additional reservations are needed when purchasing Flagship Cruises & Events tickets through FunEx. Your dated discount tickets serve as your reservation already. One of the perks FunEx has been offering is that you do not need to pay varying prices on tickets on your selected date(s). We have the lowest prices in the market!

  2. When can I receive my Flagship Cruises & Events discount tickets?

    You will receive your FunEx Flagship Cruises & Events tickets and your receipt immediately after your successful online purchase.

  3. Where is Flagship Cruises & Events located?

    Flagship is located at 990 N Harbor Dr, San Diego, CA, 92101.

  4. Do I need to purchase Flagship Cruises & Events discount ticket for my child?

    Babies and toddlers (those younger than four years old) are admitted free of charge. However, children aged four and up are welcome to join the tour if they purchase a Flagship Cruises & Events discount ticket and are accompanied by an adult.

  5. Are these boats safe?

    All of their boats pass regular inspections and have Coast Guard approval.

  6. Could I possibly feel seasick?

    The waters of San Diego Bay are often relatively calm; thus, seasickness is uncommon. It is recommended that those susceptible to motion sickness take any necessary medicine before boarding the ferry. Motion sickness wristbands are also effective. Both are widely available at pharmacies, the dockside gift shop, or the Wheelhouse Gift Shop.

  7. Can I get help boarding?

    Yes. Wheelchair users and those who require assistance boarding a vessel can count on assistance from Flagship Cruises & Events' uniformed employees, who can help with the steep ramps connecting the shore to the docks.

  8. Do you allow ticket changes and cancellations?

    Bookings are final and cannot be refunded. If you need to change your cruise time or date, please let us know at least 24-48 hours in advance.

  9. Do any of the ships permit animals?

    Except for the Patriot Jet Boat, all boats are accessible to passengers with service animals.

Last updated July 12, 2023.

Flagship Cruises & Events Tickets

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  • Adult (Ages 13+ yrs)

    Regular price $33.00

    Discounted Price $23.50

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  • Child (Ages 4-12 yrs)

    Regular price $24.75

    Discounted Price $17.75

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